| Banants Yerevan | Young Boys | 1-1 / 0-4 |
| Dinamo Tbilissi | FC Vaduz | 2-0 / 0-0 |
| Santa Coloma | Maccabi Tel-Aviv | 1-0 / 0-4 |
| Vion Zlate Moravce | Alma Ata | 3-1 / 1-1 |
| Flora Tallinn | Valerenga | 0-1 / 0-1 |
| NK Slaven Koprivnica | KS Teuta | 6-2 / 2-2 |
| FC Nistru | Budapest Honved | 1-1 / 1-1 (pen.) |
| HJK Helsinki | Etzella Ettelbruck | 2-0 / 1-0 |
| MyPa | EB Streymur | 1-0 / 1-1 |
| Vojvodina | Hibernians Paola | 5-1 / 2-0 |
| Liepajas Metalurgs | Dinamo Brest | 1-1 / 2-1 |
| Skonto Riga | Dinamo Minsk | 1-1 / 0-2 |
| B36 Torshavn | FK Ekranas | 1-3 / 2-3 |
| Helsingborgs IF | Trans Narva | 6-0 / 3-0 |
| Lillestrom | Kaerjeng | 2-1 / 0-1 |
| Omonia Nicosia | Rudar Pljevlja | 2-0 / 2-0 |
| Sliema Wanderers | Litex Lovetch | 0-3 / 0-4 |
| Artmedia Bratislava | FC Zimbru | 1-1 / 2-2 |
| BK Hacken | KR Reykjavik | 1-1 / 1-0 |
| Carmarthen | SK Brann | 0-8 / 3-6 |
| HiT Gorica | Rabotnicki Kometal | 1-2 / 1-2 |
| Vardar Skopje | Anorthosis Famagusta | 0-1 / 0-1 |
| Zrinjski Mostar | Partizan Belgrade | 1-6 / 0-5 |
| Buducnost Podgorica | Hadjuk Split | 1-1 / 0-1 |
| MTK Budapest | Mika Ashtarak | 2-1 / 0-1 |
| Rhyl | FC Haka | 3-1 / 0-2 |
| SV Ried | Neftchi | 3-1 / 1-2 |
| Aktobe Lento | SV Mattersburg | 1-0 / 2-4 |
| Dungannon Swifts | FK Suduva | 1-0 / 0-4 |
| GKS Belchatow | Ameri Tbilisi | 2-0 / 0-2 (pen.) |
| Glentoran | AIK Solna | 0-5 / 0-4 |
| MTK Araz Imishli | Groclin Dyskobolia | 0-0 / 0-1 |
| St Patricks | Odense BK | 0-0 / 0-5 |
| Libertas | Drogheda Utd | 1-1 / 0-3 |
| Siroki Brijeg | Koper | 3-1 / 3-2 |
| Keflavik | FC Midtjylland | 3-2 / 1-2 |
| Bezanija Belgrade | Besa Kavaje | 0-0 / 2-2 |
